Review



data analysis spatial transcriptomic experiment  (10X Genomics)

 
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 86
      Buy from Supplier

    Structured Review

    10X Genomics data analysis spatial transcriptomic experiment
    Data Analysis Spatial Transcriptomic Experiment, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spatial+transcriptomics+data/pm42226209-88-10-38
    Average 86 stars, based on 1 article reviews
    data analysis spatial transcriptomic experiment - by Bioz Stars, 2026-09
    86/100 stars

    Images

    Related Articles

    RNA Sequencing:

    Article Title: Interactions between MFAP5 + fibroblasts and tumor-infiltrating myeloid cells shape the malignant microenvironment of colorectal cancer
    Article Snippet: .. In this study, we integrated six independent public datasets that contained single-cell RNA sequencing data (downloaded from Gene Expression Omnibus (GEO) repository: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE144735 ) [ ], spatial transcriptomics data (10X Genomics) (derived from a previous published research at website: http://www.cancerdiversity.asia/scCRLM/ ) [ ], and four bulk transcriptomics of colon and rectal cancer (downloaded from TCGA cohort COAD and READ at website: https://xena.ucsc.edu/ ; GSE14333 and GSE17536 cohorts were downloaded from GEO repository). ..

    Gene Expression:

    Article Title: Interactions between MFAP5 + fibroblasts and tumor-infiltrating myeloid cells shape the malignant microenvironment of colorectal cancer
    Article Snippet: .. In this study, we integrated six independent public datasets that contained single-cell RNA sequencing data (downloaded from Gene Expression Omnibus (GEO) repository: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE144735 ) [ ], spatial transcriptomics data (10X Genomics) (derived from a previous published research at website: http://www.cancerdiversity.asia/scCRLM/ ) [ ], and four bulk transcriptomics of colon and rectal cancer (downloaded from TCGA cohort COAD and READ at website: https://xena.ucsc.edu/ ; GSE14333 and GSE17536 cohorts were downloaded from GEO repository). ..

    Derivative Assay:

    Article Title: Interactions between MFAP5 + fibroblasts and tumor-infiltrating myeloid cells shape the malignant microenvironment of colorectal cancer
    Article Snippet: .. In this study, we integrated six independent public datasets that contained single-cell RNA sequencing data (downloaded from Gene Expression Omnibus (GEO) repository: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE144735 ) [ ], spatial transcriptomics data (10X Genomics) (derived from a previous published research at website: http://www.cancerdiversity.asia/scCRLM/ ) [ ], and four bulk transcriptomics of colon and rectal cancer (downloaded from TCGA cohort COAD and READ at website: https://xena.ucsc.edu/ ; GSE14333 and GSE17536 cohorts were downloaded from GEO repository). ..



    Similar Products

    stereo seq spatial transcriptomics data  (Complete Genomics Inc)
    98
    Complete Genomics Inc stereo seq spatial transcriptomics data
    Stereo Seq Spatial Transcriptomics Data, supplied by Complete Genomics Inc, used in various techniques. Bioz Stars score: 98/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spatial+transcriptomics+data/Stereo-seq+Transcriptomics+Set/pm42091869-364-0-4
    Average 98 stars, based on 1 article reviews
    stereo seq spatial transcriptomics data - by Bioz Stars, 2026-09
    98/100 stars
    		  Buy from Supplier
    data analysis spatial transcriptomic experiment  (10X Genomics)
    86
    10X Genomics data analysis spatial transcriptomic experiment
    Data Analysis Spatial Transcriptomic Experiment, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spatial+transcriptomics+data/pm42226209-88-10-38
    Average 86 stars, based on 1 article reviews
    data analysis spatial transcriptomic experiment - by Bioz Stars, 2026-09
    86/100 stars
    		  Buy from Supplier
    spatial transcriptomic data  (10X Genomics)
    86
    10X Genomics spatial transcriptomic data
    Spatial Transcriptomic Data, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spatial+transcriptomics+data/pmc13259748-212-0-10
    Average 86 stars, based on 1 article reviews
    spatial transcriptomic data - by Bioz Stars, 2026-09
    86/100 stars
    		  Buy from Supplier
    spatial transcriptomics data  (Complete Genomics Inc)
    99
    Complete Genomics Inc spatial transcriptomics data
    Single-nucleus transcriptome and spatial <t>transcriptomics</t> landscape of the ileal tissue of SAP and CON group rats. (A) Schematic illustration of the workflow for this study. (B) Representative Hematoxylin and Eosin (H&E)–stained ileal sections from CON and SAP rats. (C) UMAP plot of single-nucleus transcriptome profiles of SAP and CON group samples. Colors indicate groups, clusters and cell types. (D) Heatmap plot of marker genes for cell annotation. (E) Bar plot showing cell-type proportions (mean ± SEM) in snRNA-seq data. (F) Spatial transcriptomics profiles of SAP and CON group samples. Colors indicate cell types. (G) Bar plot showing cell-type proportions (mean ± SEM) in spatial transcriptomics (Stereo-seq) data. Statistical significance: ns, not significant; *P < 0.05; **P < 0.01; ***P < 0.001; ****P < 0.0001.
    Spatial Transcriptomics Data, supplied by Complete Genomics Inc, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/spatial+transcriptomics+data/Stereo-seq+Transcriptomics+Set+for+FFPE/pmc12901460-62-1-11
    Average 99 stars, based on 1 article reviews
    spatial transcriptomics data - by Bioz Stars, 2026-09
    99/100 stars
    		  Buy from Supplier

    Image Search Results


    Single-nucleus transcriptome and spatial transcriptomics landscape of the ileal tissue of SAP and CON group rats. (A) Schematic illustration of the workflow for this study. (B) Representative Hematoxylin and Eosin (H&E)–stained ileal sections from CON and SAP rats. (C) UMAP plot of single-nucleus transcriptome profiles of SAP and CON group samples. Colors indicate groups, clusters and cell types. (D) Heatmap plot of marker genes for cell annotation. (E) Bar plot showing cell-type proportions (mean ± SEM) in snRNA-seq data. (F) Spatial transcriptomics profiles of SAP and CON group samples. Colors indicate cell types. (G) Bar plot showing cell-type proportions (mean ± SEM) in spatial transcriptomics (Stereo-seq) data. Statistical significance: ns, not significant; *P < 0.05; **P < 0.01; ***P < 0.001; ****P < 0.0001.

    Journal: Frontiers in Immunology

    Article Title: Single-nucleus and spatial transcriptomics reveal intestinal cellular heterogeneity, differentiation, and cell communication mechanisms in SAP-induced intestinal injury

    doi: 10.3389/fimmu.2026.1719902

    Figure Lengend Snippet: Single-nucleus transcriptome and spatial transcriptomics landscape of the ileal tissue of SAP and CON group rats. (A) Schematic illustration of the workflow for this study. (B) Representative Hematoxylin and Eosin (H&E)–stained ileal sections from CON and SAP rats. (C) UMAP plot of single-nucleus transcriptome profiles of SAP and CON group samples. Colors indicate groups, clusters and cell types. (D) Heatmap plot of marker genes for cell annotation. (E) Bar plot showing cell-type proportions (mean ± SEM) in snRNA-seq data. (F) Spatial transcriptomics profiles of SAP and CON group samples. Colors indicate cell types. (G) Bar plot showing cell-type proportions (mean ± SEM) in spatial transcriptomics (Stereo-seq) data. Statistical significance: ns, not significant; *P < 0.05; **P < 0.01; ***P < 0.001; ****P < 0.0001.

    Article Snippet: The spatial transcriptomics data were obtained according to the protocol of STOmics Gene Expression Set-S1 on the website ( https://www.stomics.tech/ ), which is an improved version of initial procedures.

    Techniques: Spatial Transcriptomics, Staining, Marker